nature-writing
Draft, restructure, or plan Nature-style manuscript sections and initial-submission materials from author-provided claims, results, figures, notes, or Chinese drafts. Use for abstracts, introductions, related work, methods, Results or experiments, discussions, conclusions, titles, full manuscript ar
By yuan1z0825 · 10,821 installs
npx skills add yuan1z0825/nature-skills --skill nature-writing
Source repository · Upstream listing
Nature Style Scientific Writing — Router
This skill is split into two layers:
A static layer under static/ that holds versioned, reusable content fragments (core stance + workflow, paper type playbooks, per section drafting guidance, initial submission guidance, language specific rules, per journal style).
A dynamic layer (this file plus manifest.yaml ) that detects the request's axes and loads only the fragments needed for the current job.
Do not try to apply the drafting logic from memory or from this router. Always load fragments from disk as described below.
Routing protocol
Follow these five steps every time the skill is invoked.
1. Load the manifest and the core layer
Read [manifest.yaml](manifest.yaml). It declares the axes ( task , paper type , section , language , journal ), the allowed values, and the file paths each value maps to.
Also read every file listed under always load . These hold the default stance, writing workflow, and output format that apply to every drafting job.
2. Detect the axis values for this request
For each axis in the manifest, decide the value using the manifest's detect: hint and the user's input:
task — manuscript / submission package. Use submission package for first submission materials, never for revision correspondence.
paper type — research / methods / hypothesis / algorithmic / review. Default: research.
section — abstract / intro / related work / method / experiments / discussion / conclusion / title. May be multiple. Ask the user if it is ambiguous and matters for the draft.
language — en or zh to en. Detect from the user's notes themselves.
journal — nature / nature family / nat comms / nat mach intell / generic.
Default: generic. Use nature only for the flagship journal Nature,
nat comms for Nature Communications, nat mach intell for Nature Machine
Intelligence (NMI), and nature family for other Nature Portfolio titles or
an unspecified Nature family request.
State the detected axis values in one short line to the user before drafting, so they can correct you cheaply. This is a progress update, not an approval gate; continue unless a necessary decision remains unresolved.
3. Load the matching fragments
For each axis value, Read the file mapped in the manifest. Skip the section axis when the task is submission package or when the user explicitly asks for a free floating argument paragraph with no section context.
Do not read every fragment in static/ . Load only what step 2 selected.
4. Draft using the loaded material
Apply the loaded fragments in this priority order:
1. Core stance + intake ( core/stance.md ) — surface missing claim / evidence / boundary before drafting.
2. Paper type playbook — argument chain, drafting order.
3. Section specific drafting rules and structure.
4. Task specific submission rules when task=submission package .
5. Journal specific framing and constraints.
6. Language specific sentence and paragraph rules (apply last).
For task=manuscript , run the workflow in core/workflow.md end to end. Do not skip planning just because the user asked for prose immediately.
When drafting or restructuring Results, or compressing a full manuscript's main
text, also load ../nature shared/core/main text discipline.md before building
the paragraph map. Classify every result by function, allocate it across main
text, captions, Methods/source data, and SI, then draft the shortest sufficient
evidence chain. Do not equate a complete analysis record with a complete main
text.
When the target is flagship Nature, Nature Communications, Nature Machine
Intelligence, or another Nature Portfolio title, load the matching shared
Nature style corpus guidance for the section being drafted:
Results or Discussion →
../nature shared/core/nature results discussion.md
Introduction or whole manuscript narrative →
../nature shared/core/nature introduction.md
Abstract → ../nature shared/core/nature abstract.md
Use these files for claim escalation, question chain alignment,
discovery centred compression, and synthesis. They were initially distilled
from published NMI papers and generalized as Nature style defaults; do not
present them as official policy, and let the target journal's current rules
override them.
For any Discussion drafting, restructuring, or section audit, also load
../nature shared/core/discussion argument language.md . Use it to select the
opening anchor, control the reverse funnel expansion, distinguish literature
positioning from citation decoration, calibrate modal strength to evidence,
and turn limitations and future work into claim specific reasoning. This is
general writing guidance rather than an official journal rule.
For task=submission package , follow static/fragments/task/submission package.md and references/submission package.md instead. Build the deliverable matrix and readiness audit; do not force manuscript paragraph architecture onto administrative submission materials.
If essential evidence or boundary is missing, write a placeholder and list it under Assumptions or missing inputs: instead of inventing content.
5. Reach for references only when needed
The files under references/ are deep references and the example library, not defaults. Open them on demand per the references.on demand table in the manifest. Typical triggers:
The user asks for a concrete example or template → references/examples/index.md .
A section's draft has structural problems that the section fragment alone does not explain → the matching references/<section .md .
The user needs a broad audience Nature abstract opening or asks about a summary paragraph → references/nature summary paragraph.md .
The user asks "does this paragraph flow?" → references/paragraph flow.md .
The user asks for a self review or rejection risk audit → references/paper review.md .
The user asks what belongs in the main text, captions, or SI; wants a shorter
Results section; or is adding reviewer driven explanation →
../nature shared/core/main text discipline.md .
The user requests a complete first submission package, templates, or a submission readiness audit → references/submission package.md .
The target is the flagship journal Nature and exact submission or formatting
requirements matter → ../nature shared/journal formats/nature.md .
The target is Nature Machine Intelligence and exact content type, submission,
data/code or production requirements matter →
../nature shared/journal formats/nature machine intelligence.md .
Any Nature / Nature Portfolio target needs Results claim progression,
evidence bound interpretation, robustness placement, or Discussion synthesis
→ ../nature shared/core/nature results discussion.md .
Any target needs a Discussion function chain, evidence calibrated modal
language, claim specific limitations, non redundant literature positioning,
or uncertainty driven future work →
../nature shared/core/discussion argument language.md .
Any Nature / Nature Portfolio target needs an Introduction funnel, exact gap,
literature logic, question first novelty, study roadmap, or alignment with
Results → ../nature shared/core/nature introduction.md .
Any Nature / Nature Portfolio target needs abstract evidence chain,
main/supporting claim, numeric result, or final payoff decisions →
../nature shared/core/nature abstract.md .
The work involves regulated or specialist research compliance →
../nature shared/core/research compliance.md .
Submission boundary
nature writing owns initial submission materials prepared before peer review.
nature response owns revision cover letters, rebuttals, point by point responses, marked manuscripts, appeals, and other post decision correspondence.
Route graphical abstracts and TOC graphics to nature figure ; route simulated pre submission peer review to nature reviewer .
Why this split
The static layer is versioned and reviewable. Adding a new journal style, paper type, or section is one new file plus one manifest line.
The dynamic layer keeps each invocation cheap: only the fragments relevant to this draft enter context, instead of the full multi thousand line reference set.
The router itself is short on purpose. Update fragments, not this file, when adding scope.
This structure mirrors nature polishing so shared content can later be lifted into a nature shared/ layer used by both skills.