instrumenting-with-mlflow-tracing
Instruments Python and TypeScript code with MLflow Tracing for observability. Must be loaded when setting up tracing as part of any workflow including agent evaluation. Triggers on adding tracing, instrumenting agents/LLM apps, getting started with MLflow tracing, tracing specific frameworks (LangGr
By mlflow · 710 installs
npx skills add mlflow/skills --skill instrumenting-with-mlflow-tracing
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MLflow Tracing Instrumentation Guide
Language Specific Guides
Based on the user's project, load the appropriate guide:
Python projects : Read references/python.md
TypeScript/JavaScript projects : Read references/typescript.md
If unclear, check for package.json (TypeScript) or requirements.txt / pyproject.toml (Python) in the project.
Databricks: verify auth and use Unity Catalog trace storage by default
When the target is Databricks, read references/databricks.md before editing code and configure a UnityCatalog trace location. Calling only mlflow.set tracking uri("databricks") and mlflow.set experiment(...) without a trace location uses legacy workspace experiment storage; that does not satisfy a request to send traces to Databricks.
Use existing project or environment configuration for the catalog, schema, optional table prefix, and SQL warehouse when available. If the required values cannot be discovered, ask the user for them before implementing tracing. Do not silently fall back to legacy workspace trace storage. Use legacy storage only when the user explicitly requests it.
Verify auth and the target workspace before the first run. An expired token, or a default profile pointed at the wrong workspace, drops traces silently at export with no error raised.
If auth is expired, run databricks auth login profile <name . Never print or persist the output of databricks auth token in an agent transcript.
What to Trace
Trace these operations (high debugging/observability value):
Operation Type Examples Why Trace
Root operations Main entry points, top level pipelines, workflow steps End to end latency, input/output logging
LLM calls Chat completions, embeddings Token usage, latency, prompt/response inspection
Retrieval Vector DB queries, document fetches, search Relevance debugging, retrieval quality
Tool/function calls API calls, database queries, web search External dependency monitoring, error tracking
Agent decisions Routing, planning, tool selection Understand agent reasoning and choices
External services HTTP APIs, file I/O, message queues Dependency failures, timeout tracking
Skip tracing these (too granular, adds noise):
Simple data transformations (dict/list manipulation)
String formatting, parsing, validation
Configuration loading, environment setup
Logging or metric emission
Pure utility functions (math, sorting, filtering)
Rule of thumb : Trace operations that are important for debugging and identifying issues in your application.
Verification
After instrumenting the code, always verify that tracing is working .
Planning to evaluate your agent? Tracing must be working before you run agent evaluation . Complete verification below first.
1. Run the instrumented code — execute the application or agent so that at least one traced operation fires
2. Confirm traces are logged — use mlflow.search traces() or MlflowClient().search traces() to check that traces appear in the experiment. If the trace is not found, try mlflow.flush trace async logging() to flush the background queue.
3. Verify spans were captured — confirm the trace contains the expected spans, not just an empty shell:
4. Report the result — tell the user how many traces and spans were found and confirm tracing is working
If no traces appear
Check these in order:
Verification ran before traces were exported — trace logging is asynchronous by default, so an in process search traces() right after the run can return zero before the background queue flushes (up to a few seconds later). Call mlflow.flush trace async logging() before searching, as shown above.
Tracking URI not set — is mlflow.set tracking uri(...) called before the agent run? Without this, traces go to a local ./mlruns directory instead of the configured server.
Autolog warnings — did mlflow.autolog() or framework specific mlflow.<framework .autolog() raise any warnings during setup? Check stderr for patching failures.
Wrong experiment ID — verify the experiment ID passed to search traces() matches the experiment active when the code ran ( mlflow.get experiment by name(...) to confirm).
Network/auth issues — can the process reach the tracking server? Check for connection errors or 401/403 responses in logs.
For automated validation, use agent evaluation/scripts/validate tracing runtime.py .
Feedback Collection
Log user feedback on traces for evaluation, debugging, and fine tuning. Essential for identifying quality issues in production.
See references/feedback collection.md for:
Recording user ratings and comments with mlflow.log feedback()
Capturing trace IDs to return to clients
LLM as judge automated evaluation
Reference Documentation
Production Deployment
See references/production.md for:
Environment variable configuration
Async logging for low latency applications
Sampling configuration (MLFLOW TRACE SAMPLING RATIO)
Lightweight SDK ( mlflow tracing )
Docker/Kubernetes deployment
Advanced Patterns
See references/advanced patterns.md for:
Async function tracing
Multi threading with context propagation
PII redaction with span processors
Distributed Tracing
See references/distributed tracing.md for:
Propagating trace context across services
Client/server header APIs
Databricks (Unity Catalog storage)
See references/databricks.md for the required Databricks default: storing traces in Unity Catalog Delta tables by binding an experiment to a UnityCatalog trace location (catalog, schema, table prefix).
Next: debug from the traces you just captured
Tracing is now in place. When you move on to debug or improve the agent's behavior, read the spans first. Do not fall back to reading source code and output files alone. The trace shows what each step actually received, produced, and decided, which is the evidence source that pins down where behavior went wrong.
Load the fix agent issue skill for this. It grounds the diagnosis in the trace, what the agent did, what it should have done, and why, before any code change, and codifies the fix as a regression test so it sticks. Reach for it as soon as you start asking why the agent produced a given output, not only when someone explicitly reports a bug.